BLASTX 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tca-03g19.b1  CHROMAT_FILE: tca-03g19.b1 PHD_FILE:
tca-03g19.b1.phd.1 CHEM: term DYE: big TIME: Sat Jul 22 12:26:52 2000
TEMPLATE: tca-03g19 DIRECTION: fwd
         (569 letters)

Database: /usr/local/databases/blast/nr
           760,810 sequences; 242,055,612 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P05659|MYSN_ACACA MYOSIN II HEAVY CHAIN, NON MUSCLE >gi|84077...    36  0.50
ref|NP_004450.1| fetal Alzheimer antigen [Homo sapiens] >gi|6015...    35  0.65
dbj|BAA89208.1| (AB032251) bromodomain PHD finger transcription ...    35  0.65
sp|P31816|TPMM_LOCMI TROPOMYOSIN, MUSCLE >gi|280581|pir||A60364 ...    35  0.85
dbj|BAA95815.1| (AP002069) Similar to Arabidopsis thaliana chrom...    35  1.1
gb|AAD13769.1| (AF097904) myosin heavy chain [Rana catesbeiana]        35  1.1
dbj|BAB47493.1| (AB058767) KIAA1864 protein [Homo sapiens]             34  1.9
emb|CAC51393.1| (AJ250106) Bicaudal D protein [Mus musculus]           34  1.9
dbj|BAA31674.1| (AB014599) KIAA0699 protein [Homo sapiens]             33  2.5
ref|XP_046863.1| KIAA0699 protein [Homo sapiens]                       33  2.5
gb|AAH04296.1|AAH04296 (BC004296) Similar to Bicaudal D (Drosoph...    33  2.5
ref|XP_046864.1| KIAA0699 protein [Homo sapiens]                       33  2.5
emb|CAA09938.2| (AJ012184) tropomyosin [Chironomus kiiensis]           33  3.2
ref|NP_003557.1| early endosome antigen 1, 162kD; early endosome...    33  4.2
ref|XP_018197.1| early endosome antigen 1, 162kD [Homo sapiens] ...    33  4.2
pir||S44243 endosomal protein - human >gi|475934|emb|CAA55632.1|...    33  4.2
gb|AAG10302.1| (AF298180) tropomyosin isoform IV [Caenorhabditis...    33  4.2
ref|XP_005158.1| neurofilament 3 (150kD medium) [Homo sapiens]         32  5.5
ref|NP_005373.1| neurofilament 3 (150kD medium) [Homo sapiens] >...    32  5.5
ref|XP_030072.1| KIAA1864 protein [Homo sapiens]                       32  5.5
gb|AAF72534.1|AF260897_1 (AF260897) tropomyosin [Blattella germa...    32  5.5
ref|NP_014615.1| Hypothetical ORF; Yol027cp [Saccharomyces cerev...    32  7.2
pir||B25242 tropomyosin, exon 9C - fruit fly (Drosophila melanog...    32  7.2
pir||A25242 tropomyosin, exon 9B - fruit fly (Drosophila melanog...    32  7.2
gb|AAF03038.1|AF092420_1 (AF092420) NADH dehydrogenase subunit I...    32  7.2
emb|CAA71688.1| (Y10687) purine NTPase [Sulfolobus acidocaldarius]     32  7.2
pir||C25242 tropomyosin, exon 9D - fruit fly (Drosophila melanog...    32  7.2
gb|AAC38445.1| (AF012927) fibrinogen-binding protein [Streptococ...    32  9.4
gb|AAB41889.1| (U85022) slow myosin heavy chain 1 [Gallus gallus]      32  9.4
dbj|BAA04557.1| (D17682) Mag44 [Dermatophagoides farinae]              32  9.4
sp|Q9NFZ4|TPM_LEPDS TROPOMYOSIN (ALLERGEN LEP D 10) >gi|6900304|...    32  9.4
sp|O18416|TPM_DERPT TROPOMYOSIN (ALLERGEN DER P 10) >gi|2440053|...    32  9.4
gb|AAB69424.1| (AF016278) tropomyosin [Dermatophagoides pteronys...    32  9.4
gb|AAB41890.1| (U85023) slow myosin heavy chain 2 [Gallus gallus]      32  9.4

>sp|P05659|MYSN_ACACA MYOSIN II HEAVY CHAIN, NON MUSCLE
 pir||A27224 myosin heavy chain II - Acanthamoeba castellanii
 emb|CAA68663.1| (Y00624) myosin heavy chain [Acanthamoeba castellanii]
          Length = 1509

 Score = 35.8 bits (81), Expect = 0.50
 Identities = 20/55 (36%), Positives = 32/55 (57%)
 Frame = +2

Query: 107  DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDK 271
            ++ +A +  L QK  L   + E  KA LEE E++RK +Q  + + E+ R E +DK
Sbjct: 937  EETSASNDILEQKRKLEAEKGEL-KASLEEEERNRKALQEAKTKVESERNELQDK 990


>ref|NP_004450.1| fetal Alzheimer antigen [Homo sapiens]
 sp|Q12830|FALZ_HUMAN FETAL ALZHEIMER ANTIGEN (FETAL ALZ-50-REACTIVE CLONE 1)
 pir||G01252 small GTP binding protein SEC4 homolog - human
 gb|AAA97522.1| (U05237) FAC1 gene product [Homo sapiens]
          Length = 810

 Score = 35.4 bits (80), Expect = 0.65
 Identities = 21/64 (32%), Positives = 36/64 (55%), Gaps = 2/64 (3%)
 Frame = +2

Query: 95  ANGADK--MAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFED 268
           A G++K  +AA +  + + I       +  K+P EE EKD+   +   K+AE  R+EFED
Sbjct: 402 ARGSNKSFLAAANEEILESIRAKKGDIDNVKSP-EETEKDKNETENDSKDAEKNREEFED 460

Query: 269 KEVQ 280
           + ++
Sbjct: 461 QSLE 464


>dbj|BAA89208.1| (AB032251) bromodomain PHD finger transcription factor [Homo
           sapiens]
          Length = 2781

 Score = 35.4 bits (80), Expect = 0.65
 Identities = 21/64 (32%), Positives = 36/64 (55%), Gaps = 2/64 (3%)
 Frame = +2

Query: 95  ANGADK--MAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFED 268
           A G++K  +AA +  + + I       +  K+P EE EKD+   +   K+AE  R+EFED
Sbjct: 402 ARGSNKSFLAAANEEILESIRAKKGDIDNVKSP-EETEKDKNETENDSKDAEKNREEFED 460

Query: 269 KEVQ 280
           + ++
Sbjct: 461 QSLE 464


>sp|P31816|TPMM_LOCMI TROPOMYOSIN, MUSCLE
 pir||A60364 tropomyosin - migratory locust
 prf||1709237A tropomyosin [Locusta migratoria]
          Length = 283

 Score = 35.0 bits (79), Expect = 0.85
 Identities = 16/70 (22%), Positives = 38/70 (53%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAE G++ + E+E++ ++V    K  E + ++   +E +++
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGESKIVELEEELRVVGNNLKSLEVSEEKANQREEEIS 222

Query: 287 SKLLNIETYL 316
           ++L  + T L
Sbjct: 223 NRLRTLTTRL 232


>dbj|BAA95815.1| (AP002069) Similar to Arabidopsis thaliana chromosome II BAC F13B15
           genomic sequence, putative non-LTR retroelement reverse
           transcriptase. (AC006300) [Oryza sativa]
          Length = 1285

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = +2

Query: 68  PAQPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEA 247
           P++ RR P+A  +D +A+    L Q  N  +     G A LE  EK R   +    EA+A
Sbjct: 587 PSRERRFPAAKPSDVVASSYLTLLQAANYASF--SFGYA-LELEEKLRARERDAAAEADA 643

Query: 248 ARKEFEDKEVQ--LASKLLNIETYL 316
            RKE E+K ++   A+K   ++ YL
Sbjct: 644 VRKELEEKALRELAAAKAAAVQEYL 668


>gb|AAD13769.1| (AF097904) myosin heavy chain [Rana catesbeiana]
          Length = 879

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +2

Query: 134 LTQKINLITSR-AETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLASKLLNIET 310
           L Q+I+ +T + +ETGK  + E+EK +KLV+  + + +AA +E E       SK+L I+ 
Sbjct: 445 LQQEISDLTEQISETGKT-VHELEKAKKLVEQEKSDLQAALEEAEGSLEHEESKILRIQL 503

Query: 311 YL 316
            L
Sbjct: 504 EL 505


>dbj|BAB47493.1| (AB058767) KIAA1864 protein [Homo sapiens]
          Length = 660

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 26/86 (30%), Positives = 35/86 (40%)
 Frame = +2

Query: 53  ERPTRPAQPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQ 232
           E P  P   R+ PS     +   +   L ++      R E  KA  E +EK R L + + 
Sbjct: 144 EAPHEPDDQRQVPSGGRRGRKDRERERLEKE------RLEREKAERERLEKLRALEERSD 197

Query: 233 KEAEAARKEFEDKEVQLASKLLNIET 310
            E E      E KE  L    LNI+T
Sbjct: 198 WEGEGEEDHEEKKEKDLGVPFLNIQT 223


>emb|CAC51393.1| (AJ250106) Bicaudal D protein [Mus musculus]
          Length = 820

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 19/77 (24%), Positives = 37/77 (47%)
 Frame = +2

Query: 74  QPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAAR 253
           + R +  A    +  A+  ALT+KI+L+   +   +  L  +EK+ K V     E + + 
Sbjct: 463 EAREAQHAEEKGRYEAEGQALTEKISLLEKASHQDRELLAHLEKELKKVSDVAGETQGSL 522

Query: 254 KEFEDKEVQLASKLLNI 304
              +D+ V  + +L N+
Sbjct: 523 NVAQDELVTFSEELANL 539


>dbj|BAA31674.1| (AB014599) KIAA0699 protein [Homo sapiens]
          Length = 847

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 18/77 (23%), Positives = 37/77 (47%)
 Frame = +2

Query: 74  QPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAAR 253
           + R +  A    +  A+  ALT+K++L+   +   +  L  +EK+ K V     E + + 
Sbjct: 453 EAREAQHAEEKGRYEAEGQALTEKVSLLEKASRQDRELLARLEKELKKVSDVAGETQGSL 512

Query: 254 KEFEDKEVQLASKLLNI 304
              +D+ V  + +L N+
Sbjct: 513 SVAQDELVTFSEELANL 529


>ref|XP_046863.1| KIAA0699 protein [Homo sapiens]
          Length = 841

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 18/77 (23%), Positives = 37/77 (47%)
 Frame = +2

Query: 74  QPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAAR 253
           + R +  A    +  A+  ALT+K++L+   +   +  L  +EK+ K V     E + + 
Sbjct: 447 EAREAQHAEEKGRYEAEGQALTEKVSLLEKASRQDRELLARLEKELKKVSDVAGETQGSL 506

Query: 254 KEFEDKEVQLASKLLNI 304
              +D+ V  + +L N+
Sbjct: 507 SVAQDELVTFSEELANL 523


>gb|AAH04296.1|AAH04296 (BC004296) Similar to Bicaudal D (Drosophila) homolog 1 [Homo
           sapiens]
          Length = 586

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 18/77 (23%), Positives = 37/77 (47%)
 Frame = +2

Query: 74  QPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAAR 253
           + R +  A    +  A+  ALT+K++L+   +   +  L  +EK+ K V     E + + 
Sbjct: 223 EAREAQHAEEKGRYEAEGQALTEKVSLLEKASRQDRELLARLEKELKKVSDVAGETQGSL 282

Query: 254 KEFEDKEVQLASKLLNI 304
              +D+ V  + +L N+
Sbjct: 283 SVAQDELVTFSEELANL 299


>ref|XP_046864.1| KIAA0699 protein [Homo sapiens]
          Length = 560

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 18/77 (23%), Positives = 37/77 (47%)
 Frame = +2

Query: 74  QPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAAR 253
           + R +  A    +  A+  ALT+K++L+   +   +  L  +EK+ K V     E + + 
Sbjct: 197 EAREAQHAEEKGRYEAEGQALTEKVSLLEKASRQDRELLARLEKELKKVSDVAGETQGSL 256

Query: 254 KEFEDKEVQLASKLLNI 304
              +D+ V  + +L N+
Sbjct: 257 SVAQDELVTFSEELANL 273


>emb|CAA09938.2| (AJ012184) tropomyosin [Chironomus kiiensis]
          Length = 285

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 16/70 (22%), Positives = 36/70 (50%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAE G+A + E+E++ ++V    K  E + ++   +E +  
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGEAKIVELEEELRVVGNNLKSLEVSEEKANQREEEYK 222

Query: 287 SKLLNIETYL 316
           +++  + T L
Sbjct: 223 NQIKTLTTRL 232


>ref|NP_003557.1| early endosome antigen 1, 162kD; early endosome-associated protein
            [Homo sapiens]
 pir||A57013 early endosome antigen 1 - human
 gb|AAA79121.1| (L40157) endosome-associated protein [Homo sapiens]
          Length = 1410

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 19/60 (31%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 119  AKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQT-TQKEAEAARKEFEDKEVQLASKL 295
            AK   + QK+ L   +A++ KA +E+ ++++++++   +KE E  +KEF +KE +L S++
Sbjct: 1164 AKQLLIQQKLEL-QGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEI 1222


>ref|XP_018197.1| early endosome antigen 1, 162kD [Homo sapiens]
 ref|XP_034421.1| early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1255

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 19/60 (31%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 119  AKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQT-TQKEAEAARKEFEDKEVQLASKL 295
            AK   + QK+ L   +A++ KA +E+ ++++++++   +KE E  +KEF +KE +L S++
Sbjct: 1008 AKQLLIQQKLEL-QGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEI 1066


>pir||S44243 endosomal protein - human
 emb|CAA55632.1| (X78998) endosomal protein [Homo sapiens]
          Length = 1411

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 19/60 (31%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 119  AKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQT-TQKEAEAARKEFEDKEVQLASKL 295
            AK   + QK+ L   +A++ KA +E+ ++++++++   +KE E  +KEF +KE +L S++
Sbjct: 1164 AKQLLIQQKLEL-QGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEI 1222


>gb|AAG10302.1| (AF298180) tropomyosin isoform IV [Caenorhabditis elegans]
          Length = 256

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 22/93 (23%), Positives = 44/93 (46%), Gaps = 7/93 (7%)
 Frame = +2

Query: 53  ERPTRPAQPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQ 232
           ER  R  Q     + N A+++A K   +   +     RAE G+  + E+E++ ++V    
Sbjct: 117 ERKLRECQSILHETENKAEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNL 176

Query: 233 KEAEAARKE-------FEDKEVQLASKLLNIET 310
           K  E + ++       +E++   ++S+L   ET
Sbjct: 177 KSLEVSEEKALQREDSYEEQIRTVSSRLKEAET 209


>ref|XP_005158.1| neurofilament 3 (150kD medium) [Homo sapiens]
          Length = 916

 Score = 32.3 bits (72), Expect = 5.5
 Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 1/74 (1%)
 Frame = +2

Query: 59  PTRPAQPR-RSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQK 235
           P  P + + +SP +    +  AKS      +    S+AE GK   E+ E++ K V+   K
Sbjct: 657 PKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKG--EQKEEEEKEVKEAPK 714

Query: 236 EAEAARKEFEDKEV 277
           E +  +KE + K+V
Sbjct: 715 EEKVEKKEEKPKDV 728


>ref|NP_005373.1| neurofilament 3 (150kD medium) [Homo sapiens]
 sp|P07197|NFM_HUMAN NEUROFILAMENT TRIPLET M PROTEIN (160 KDA NEUROFILAMENT PROTEIN)
           (NEUROFILAMENT MEDIUM POLYPEPTIDE) (NF-M) (NEUROFILAMENT
           3)
 pir||A27864 neurofilament triplet M protein - human
 emb|CAA68276.1| (Y00067) NF-M [Homo sapiens]
          Length = 916

 Score = 32.3 bits (72), Expect = 5.5
 Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 1/74 (1%)
 Frame = +2

Query: 59  PTRPAQPR-RSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQK 235
           P  P + + +SP +    +  AKS      +    S+AE GK   E+ E++ K V+   K
Sbjct: 657 PKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKG--EQKEEEEKEVKEAPK 714

Query: 236 EAEAARKEFEDKEV 277
           E +  +KE + K+V
Sbjct: 715 EEKVEKKEEKPKDV 728


>ref|XP_030072.1| KIAA1864 protein [Homo sapiens]
          Length = 635

 Score = 32.3 bits (72), Expect = 5.5
 Identities = 25/86 (29%), Positives = 35/86 (40%)
 Frame = +2

Query: 53  ERPTRPAQPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQ 232
           E P  P   R+ PS     +   +   L ++      R E  +A  E +EK R L + + 
Sbjct: 119 EAPHEPDDQRQVPSGGRRGRKDRERERLEKE------RLEREEAERERLEKLRALEERSD 172

Query: 233 KEAEAARKEFEDKEVQLASKLLNIET 310
            E E      E KE  L    LNI+T
Sbjct: 173 WEGEGEEDHEEKKEKDLGVPFLNIQT 198


>gb|AAF72534.1|AF260897_1 (AF260897) tropomyosin [Blattella germanica]
          Length = 284

 Score = 32.3 bits (72), Expect = 5.5
 Identities = 16/70 (22%), Positives = 36/70 (50%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAETG++ + E+E++ ++V    K  E + ++   +E +  
Sbjct: 163 DEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKANLREEEYK 222

Query: 287 SKLLNIETYL 316
            ++  + T L
Sbjct: 223 QQIKTLNTRL 232


>ref|NP_014615.1| Hypothetical ORF; Yol027cp [Saccharomyces cerevisiae]
 pir||S66710 probable membrane protein YOL027c - yeast (Saccharomyces
           cerevisiae)
 emb|CAA99027.1| (Z74769) ORF YOL027c [Saccharomyces cerevisiae]
          Length = 573

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 24/81 (29%), Positives = 43/81 (52%), Gaps = 4/81 (4%)
 Frame = +2

Query: 53  ERPTRPAQPRRSPSANGADKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQ 232
           E+P   A P+   +A  +  +A  + A+T K+ ++  +AET K   EEI ++++  + T 
Sbjct: 439 EKPEETAIPKEEATAKES-VIATTASAVTPKLVVVNEKAETAKT--EEISQEKENAEPTD 495

Query: 233 K----EAEAARKEFEDKEVQL 283
                EAE  +K  +D E +L
Sbjct: 496 SAEATEAE-EKKTSDDNEFKL 515


>pir||B25242 tropomyosin, exon 9C - fruit fly (Drosophila melanogaster)
           (fragment)
          Length = 286

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 16/70 (22%), Positives = 35/70 (49%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAE G+  + E+E++ +LV    K  E + ++   +E +  
Sbjct: 163 DEVARKLAMVEADLERAEERAEQGENKIVELEEELRLVGNNLKSLEVSEEKANQREEEYK 222

Query: 287 SKLLNIETYL 316
           +++  + T L
Sbjct: 223 NQIKTLNTRL 232


>pir||A25242 tropomyosin, exon 9B - fruit fly (Drosophila melanogaster)
           (fragment)
          Length = 286

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 16/70 (22%), Positives = 35/70 (49%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAE G+  + E+E++ +LV    K  E + ++   +E +  
Sbjct: 163 DEVARKLAMVEADLERAEERAEQGENKIVELEEELRLVGNNLKSLEVSEEKANQREEEYK 222

Query: 287 SKLLNIETYL 316
           +++  + T L
Sbjct: 223 NQIKTLNTRL 232


>gb|AAF03038.1|AF092420_1 (AF092420) NADH dehydrogenase subunit II [Rachovia stellifer]
          Length = 347

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 559 WLIVLEAILVSKMLLAFSAALKNFINVIPFLRHSVHLLLQAPP 431
           W+I+LE       L A  AAL   +N+  +LR S +++L  PP
Sbjct: 263 WMILLELTKQKLFLTATMAALSALLNLYFYLRLSYNMILTTPP 305


>emb|CAA71688.1| (Y10687) purine NTPase [Sulfolobus acidocaldarius]
          Length = 886

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 17/43 (39%), Positives = 25/43 (57%)
 Frame = +2

Query: 179 KAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLASKLLNIE 307
           K  LEE EK  + ++  +KE E   K++E+ E +L   L NIE
Sbjct: 328 KKELEEKEKQYEEIEKRKKELEEKEKQYEEIEKRLTYVLKNIE 370


>pir||C25242 tropomyosin, exon 9D - fruit fly (Drosophila melanogaster)
          Length = 285

 Score = 32.0 bits (71), Expect = 7.2
 Identities = 16/70 (22%), Positives = 35/70 (49%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D++A K   +   +     RAE G+  + E+E++ +LV    K  E + ++   +E +  
Sbjct: 163 DEVARKLAMVEADLERAEERAEQGENKIVELEEELRLVGNNLKSLEVSEEKANQREEEYK 222

Query: 287 SKLLNIETYL 316
           +++  + T L
Sbjct: 223 NQIKTLNTRL 232


>gb|AAC38445.1| (AF012927) fibrinogen-binding protein [Streptococcus equi]
          Length = 534

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +2

Query: 152 LITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLASKLLNIE 307
           L+ S+A   +   ++   D K+ +  +KE EAA+ E  D +VQLA K   +E
Sbjct: 370 LVESQANVAELEKQKAASDAKVAEL-EKEVEAAKAEVADLKVQLAKKEEELE 420


>gb|AAB41889.1| (U85022) slow myosin heavy chain 1 [Gallus gallus]
          Length = 273

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 18/68 (26%), Positives = 33/68 (48%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D +  ++ AL ++ NL+ +  E  +A LE+ E+ RKL +    EA         +   L 
Sbjct: 2   DDLKEQAAALERRNNLLLAEVEELRAALEQAERSRKLAEQELLEATERVNLLHSQNTGLI 61

Query: 287 SKLLNIET 310
           ++   +ET
Sbjct: 62  NQKKKLET 69


>dbj|BAA04557.1| (D17682) Mag44 [Dermatophagoides farinae]
          Length = 299

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKE 274
           D++A K   +   +     RAETG++ + E+E++ ++V    K  E + ++ + +E
Sbjct: 178 DEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQRE 233


>sp|Q9NFZ4|TPM_LEPDS TROPOMYOSIN (ALLERGEN LEP D 10)
 emb|CAB71342.1| (AJ250096) Lep d 10 protein [Lepidoglyphus destructor]
          Length = 284

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKE 274
           D++A K   +   +     RAETG++ + E+E++ ++V    K  E + ++ + +E
Sbjct: 163 DEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQRE 218


>sp|O18416|TPM_DERPT TROPOMYOSIN (ALLERGEN DER P 10)
 emb|CAA75141.1| (Y14906) tropomyosin [Dermatophagoides pteronyssinus]
          Length = 284

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKE 274
           D++A K   +   +     RAETG++ + E+E++ ++V    K  E + ++ + +E
Sbjct: 163 DEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQRE 218


>gb|AAB69424.1| (AF016278) tropomyosin [Dermatophagoides pteronyssinus]
          Length = 284

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKE 274
           D++A K   +   +     RAETG++ + E+E++ ++V    K  E + ++ + +E
Sbjct: 163 DEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQRE 218


>gb|AAB41890.1| (U85023) slow myosin heavy chain 2 [Gallus gallus]
          Length = 761

 Score = 31.6 bits (70), Expect = 9.4
 Identities = 18/68 (26%), Positives = 33/68 (48%)
 Frame = +2

Query: 107 DKMAAKSGALTQKINLITSRAETGKAPLEEIEKDRKLVQTTQKEAEAARKEFEDKEVQLA 286
           D +  ++ AL ++ NL+ +  E  +A LE+ E+ RKL +    EA         +   L 
Sbjct: 493 DDLKEQAAALERRNNLLLAEVEELRAALEQAERSRKLAEQELLEATERVNLLHSQNTGLI 552

Query: 287 SKLLNIET 310
           ++   +ET
Sbjct: 553 NQKKKLET 560


  Database: /usr/local/databases/blast/nr
    Posted date:  Oct 2, 2001  5:36 PM
  Number of letters in database: 242,055,612
  Number of sequences in database:  760,810
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217788587
Number of Sequences: 760810
Number of extensions: 3801746
Number of successful extensions: 16972
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 15669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16923
length of query: 189
length of database: 242,055,612
effective HSP length: 54
effective length of query: 135
effective length of database: 200,971,872
effective search space: 27131202720
effective search space used: 27131202720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)