genoma.unsam.edu.ar :: tram :: Trypanosoma cruzi amastigote and trypomastigote ESTs

Sequence summaries sorted by pattern

Summaries have been sorted by their pattern of recorded features. The features are usually BLAST hits, in which case the pattern records the presence (+) or absence (-) of a significant hit against the listed databases.
Other features include the presence/absence of a spliced leader (trypanosomes).

You can also look at summaries sorted by name (alphabetically).

Click on a pattern to get a list of sequences with the corresponding hit pattern

In the following table, the databases have been encoded as follows:
N = NR Genbank (Protein)
K = Eukaryotic Clusters of Orthologous Groups (KOGs, Protein)
E = Trypanosoma cruzi epimastigote ESTs (DNA)
T = Trypanosoma cruzi WGS
t = Trypanosoma cruzi WGS, w/o low complexity filter.
S = Trypanosoma cruzi spliced leader (23 bp)

NKETtS  Number
++++++  38  
+++++-  146  
++-+++  52  
++-++-  61  
++----  7  
+-++++  17  
+-+++-  47  
+-+---  1  
+--+++  32  
+--++-  28  
+---+-  1  
+----+  2  
+-----  7  
-+++++  1  
-++++-  1  
-+-+++  3  
-+-++-  2  
--++++  73  
--+++-  180  
--+---  1  
---+++  220  
---++-  329  
----++  13  
----+-  74  
-----+  53  
------  231